Departed, Op. 25, No. 5

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Mean and standard deviations were determined from triplicate analyses independently grown cultures. These were: 3. A cell volume of 1 fl was used to calculate [P] total and [D] total from the number of protein assemblies per cell i. DNA occupancy by each sensor was normalised from zero to one using the minimum and maximum DNA occupancy values. The equilibrium concentration of free metal i. This was solved, via a quadratic equation, using initial concentrations of metal and buffer of 0.

This gives the fractional occupancy of DNA at a buffered metal concentration of 5. Complete column 'N' as described in step 8. The data supporting the findings of this study are available within the article and its Supplementary Information files, or from the corresponding author upon request. Guerra, A. Metal site occupancy and allosteric switching in bacterial metal sensor proteins. Gilston, B. Structural and mechanistic basis of zinc regulation across the E.

PLoS Biol. Gaballa, A. Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis. Outten, C.

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Changela, A. Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR.

Science , — Iwig, J. Nickel homeostasis in Escherichia coli — the rcnR-rcnA efflux pathway and its linkage to NikR function. Foster, A. Metal specificity of cyanobacterial nickel-responsive repressor InrS: cells maintain zinc and copper below the detection threshold for InrS. Irving, H.

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Order of stability of metal complexes. Nature , — Reyes-Caballero, H. Metalloregulatory proteins: metal selectivity and allosteric switching.

Metal preferences and metallation. Huang, M. Choosing the right metal: case studies of class I ribonucleotide reductases. Imlay, J. The mismetallation of enzymes during oxidative stress. Blaby-Haas, C. Lysosome-related organelles as mediators of metal homeostasis.

Macomber, L. The iron-sulfur clusters of dehydratases are primary intracellular targets of copper toxicity.

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Natl Acad. USA , — Ranquet, C. Cobalt stress in Escherichia coli : the effect on the iron-sulfur proteins. Xu, F.

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Ikeda, J. Helmann, J. Specificity of metal sensing: iron and manganese homeostasis in Bacillus subtilis. Kloosterman, T. Begg, S. Dysregulation of transition metal ion homeostasis is the molecular basis for cadmium toxicity in Streptococcus pneumoniae. Quintana, J. Copper homeostasis networks in the bacterium Pseudomonas aeruginosa.

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Djoko, K. The role of copper and zinc toxicity in innate immune defense against bacterial pathogens. Hood, M. Nutritional immunity: transition metals at the pathogen—host interface. Osman, D. Copper homeostasis in Salmonella is atypical and copper-CueP is a major periplasmic metal complex. Lisher, J. Manganese acquisition and homeostasis at the host-pathogen interface.

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Damo, S. Molecular basis for manganese sequestration by calprotectin and roles in the innate immune response to invading bacterial pathogens. Cerasi, M. Competition for zinc binding in the host-pathogen interaction. Generating a metal-responsive transcriptional regulator to test what confers metal sensing in cells. Cytosolic Ni II sensor in cyanobacterium: nickel detection follows nickel affinity across four families of metal sensors. Patterson, C. Metallomics 5 , — Dian, C. The structure of the Helicobacter pylori ferric uptake regulator Fur reveals three functional metal binding sites.

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Crystal structure of the Iron-dependent Regulator IdeR from Mycobacterium tuberculosis shows both metal binding sites fully occupied. Characterization of the metal receptor sites in Escherichia coli Zur, an ultrasensitive Zinc II metalloregulatory protein. Biochemistry 40 , — Ammendola, S. Petrarca, P.

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